miRBase entry: ppc-mir-8364a

Stem-loop ppc-mir-8364a


Accession
MI0027019
Description
Pristionchus pacificus ppc-mir-8364a precursor miRNA


Sequence

UCUUCAUUCCUCGUACUCUCUcgucucucugaccggcgAGAGAGUACGUCGAAUGAAGAGA
(((((((((..((((((((((((((.........))))))))))))))..)))))))))..

Structure
--         CU              ucu 
  UCUUCAUUC  CGUACUCUCUcguc   c
  |||||||||  ||||||||||||||   u
  AGAAGUAAG  GCAUGAGAGAgcgg   g
AG         CU              cca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ABKE03000021.1: 1736432-1736492 [+]

Database links

Mature ppc-miR-8364a-5p

Accession MIMAT0033176
Description Pristionchus pacificus ppc-miR-8364a-5p mature miRNA
Sequence 1 - UCUUCAUUCCUCGUACUCUCU - 21
Evidence experimental
Illumina [1]

Mature ppc-miR-8364a-3p

Accession MIMAT0033177
Description Pristionchus pacificus ppc-miR-8364a-3p mature miRNA
Sequence 39 - AGAGAGUACGUCGAAUGAAGAGA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260