miRBase entry: ppc-mir-8364m

Stem-loop ppc-mir-8364m


Accession
MI0027025
Description
Pristionchus pacificus ppc-mir-8364m precursor miRNA
Gene family
MIPF0001877; mir-8364


Sequence

UCUUCAUUUCCCGUGCUCUCUCAccggucagagcugugAGAUAGUGUAGGAAAUGAAGAGA
(((((((((((..((((.((((((.(((....))))))))).))))..)))))))))))..

Structure
--           CG    C      c   c 
  UCUUCAUUUCC  UGCU UCUCAc ggu a
  |||||||||||  |||| |||||| |||  
  AGAAGUAAAGG  GUGA AGAgug ucg g
AG           AU    U      -   a 


Annotation confidence Not enough data
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Genome context
ABKE03000124.1: 1028017-1028077 [+]

Database links

Mature ppc-miR-8364m-5p

Accession MIMAT0033188
Description Pristionchus pacificus ppc-miR-8364m-5p mature miRNA
Sequence 1 - UCUUCAUUUCCCGUGCUCUCUCA - 23
Evidence experimental
Illumina [1]

Mature ppc-miR-8364m-3p

Accession MIMAT0033189
Description Pristionchus pacificus ppc-miR-8364m-3p mature miRNA
Sequence 39 - AGAUAGUGUAGGAAAUGAAGAGA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260