Stem-loop ppc-mir-2235a-9

Accession

MI0027048

Description

Pristionchus pacificus ppc-mir-2235a-9 precursor miRNA

Gene family

MIPF0000825; mir-2235

Sequence

UCAUUCAAUAUUGCCGGUUUGAACgaaauugaucaguUCACCGGGAGCAUUGUAUCGA
.....((((.((.(((((..((((((......)).))))))))).)).))))......

Structure

-UCAUU    A  G     UU    -  aa 
      CAAU UU CCGGU  GAAC ga  u
      |||| || |||||  |||| ||   
      GUUA GA GGCCA  CUug cu  u
AGCUAU    C  G     --    a  ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature ppc-miR-2235a-5p

• Accession: MIMAT0032107
• Description: Pristionchus pacificus ppc-miR-2235a-5p mature miRNA
• Sequence: 1 - UCAUUCAAUAUUGCCGGUUUGAAC - 24
• Evidence: experimental ; SOLiD [1]

Mature ppc-miR-2235a-9-3p

• Accession: MIMAT0033233
• Description: Pristionchus pacificus ppc-miR-2235a-9-3p mature miRNA
• Sequence: 38 - UCACCGGGAGCAUUGUAUCGA - 58
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260