miRBase entry: ppc-mir-8364r

Stem-loop ppc-mir-8364r


Accession
MI0027063
Description
Pristionchus pacificus ppc-mir-8364r precursor miRNA
Gene family
MIPF0001877; mir-8364


Sequence

UCUUCAUUCCACGUACUGUCUcaccgaucagaguaacgaGAGAGCAUGCAAAAUGAAGAG
((((((((...(((.((.((((...............)))).)).)))...)))))))).

Structure
-        CCA   A  G    accgau 
 UCUUCAUU   CGU CU UCUc      c
 ||||||||   ||| || ||||      a
 AGAAGUAA   GUA GA AGag      g
G        AAC   C  G    caauga 


Annotation confidence Not enough data
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Genome context
ABKE03000039.1: 885212-885271 [-]

Database links

Mature ppc-miR-8364r-5p

Accession MIMAT0033262
Description Pristionchus pacificus ppc-miR-8364r-5p mature miRNA
Sequence 1 - UCUUCAUUCCACGUACUGUCU - 21
Evidence experimental
Illumina [1]

Mature ppc-miR-8364r-3p

Accession MIMAT0033263
Description Pristionchus pacificus ppc-miR-8364r-3p mature miRNA
Sequence 40 - GAGAGCAUGCAAAAUGAAGAG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260