Stem-loop ppc-mir-8364s

Accession

MI0027067

Description

Pristionchus pacificus ppc-mir-8364s precursor miRNA

Gene family

MIPF0001877; mir-8364

Sequence

UCUUCAUUCCGCGUGCUGUCUcacuggucagaaaggcgAGAGAGCAUGCGAAAUGAAGAG
((((((((.((((((((.((((.((.........)).)))).)))))))).)))))))).

Structure

-        C        G    a  ggu 
 UCUUCAUU CGCGUGCU UCUc cu   c
 |||||||| |||||||| |||| ||   a
 AGAAGUAA GCGUACGA AGAg gg   g
G        A        G    c  aaa 

Annotation confidence Not enough data

Genome context

ABKE03000060.1: 322014-322073 [+]

Mature ppc-miR-8364s-5p

• Accession: MIMAT0033270
• Description: Pristionchus pacificus ppc-miR-8364s-5p mature miRNA
• Sequence: 1 - UCUUCAUUCCGCGUGCUGUCU - 21
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8364s-3p

• Accession: MIMAT0033271
• Description: Pristionchus pacificus ppc-miR-8364s-3p mature miRNA
• Sequence: 39 - AGAGAGCAUGCGAAAUGAAGAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260