miRBase entry: str-lin-4

Stem-loop str-lin-4


Accession
MI0027102
Description
Strongyloides ratti str-lin-4 precursor miRNA


Sequence

UCCCUGAGACUCUACUUGUGAcagauuuaauaugucCCAAGUUAGAUGAUCAGGUACC
..(((((...((((((((.((((.........)))).)))).))))...)))))....

Structure
--UC     GAC    -    U    gau 
    CCUGA   UCUA CUUG GAca   u
    |||||   |||| |||| ||||   u
    GGACU   AGAU GAAC cugu   a
CCAU     AGU    U    C    aua 


Annotation confidence Not enough data
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Genome context
Sratti_scf00001_ChrX: 2025474-2025531 [+]

Database links

Mature str-lin-4-5p

Accession MIMAT0033336
Description Strongyloides ratti str-lin-4-5p mature miRNA
Sequence 1 - UCCCUGAGACUCUACUUGUGA - 21
Evidence experimental
Illumina [1]

Mature str-lin-4-3p

Accession MIMAT0033337
Description Strongyloides ratti str-lin-4-3p mature miRNA
Sequence 37 - CCAAGUUAGAUGAUCAGGUACC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260