Stem-loop str-mir-8369

Accession

MI0027108

Description

Strongyloides ratti str-mir-8369 precursor miRNA

Sequence

CUGGAGCCCAGGUUGACAAUGCauuacuaaauagcUUUGGCACCAUGGGACUCUAAU
.((((((((((((...(((.(((((....))).)).)))..))).)))).)))))..

Structure

-C     -    -   UGA   U  -   a 
  UGGAG CCCA GGU   CAA GC auu c
  ||||| |||| |||   ||| || |||  
  AUCUC GGGU CCA   GUU cg uaa u
UA     A    A   -CG   U  a   a 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_Chr02: 3568918-3568974 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from str-mir-8369

Mature str-miR-8369-5p

• Accession: MIMAT0033348
• Description: Strongyloides ratti str-miR-8369-5p mature miRNA
• Sequence: 1 - CUGGAGCCCAGGUUGACAAUGC - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-8369-3p

• Accession: MIMAT0033349
• Description: Strongyloides ratti str-miR-8369-3p mature miRNA
• Sequence: 36 - UUUGGCACCAUGGGACUCUAAU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260