Stem-loop str-mir-8371

Accession

MI0027117

Description

Strongyloides ratti str-mir-8371 precursor miRNA

Sequence

AGAUGGGUGAGUUUGCCAAAUUagugacuuuaaauacugaaUUUGCGAACGACCCUGUCCAA
.(((((((..((((((.((.((((((........)))))).)).)))))).)))).)))...

Structure

--A   -    GA      C  A      acu 
   GAU GGGU  GUUUGC AA UUagug   u
   ||| ||||  |||||| || ||||||    
   CUG CCCA  CAAGCG UU agucau   u
AAC   U    -G      U  a      aaa 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_Chr01: 395573-395634 [-]

Clustered miRNAs

20 other miRNAs are < 10 kb from str-mir-8371

Mature str-miR-8371-5p

• Accession: MIMAT0033366
• Description: Strongyloides ratti str-miR-8371-5p mature miRNA
• Sequence: 1 - AGAUGGGUGAGUUUGCCAAAUU - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-8371-3p

• Accession: MIMAT0033367
• Description: Strongyloides ratti str-miR-8371-3p mature miRNA
• Sequence: 42 - UUUGCGAACGACCCUGUCCAA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260