Stem-loop str-mir-8383

Accession

MI0027146

Description

Strongyloides ratti str-mir-8383 precursor miRNA

Sequence

UCGAAUCGUCUAGAAGUUAAUUuugauugagauuaaAUUGGCUUCGUGAUGAUUCAAA
..((((((((..(((((((((((...........)))))))))))..))))))))...

Structure

-UC        UA           ugau 
   GAAUCGUC  GAAGUUAAUUu    u
   ||||||||  |||||||||||    g
   CUUAGUAG  CUUCGGUUAaa    a
AAA        UG           uuag 

Annotation confidence Not enough data

Genome context

Sratti_scf00002_Chr01: 283545-283602 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from str-mir-8383

Mature str-miR-8383-5p

• Accession: MIMAT0033424
• Description: Strongyloides ratti str-miR-8383-5p mature miRNA
• Sequence: 1 - UCGAAUCGUCUAGAAGUUAAUU - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-8383-3p

• Accession: MIMAT0033425
• Description: Strongyloides ratti str-miR-8383-3p mature miRNA
• Sequence: 37 - AUUGGCUUCGUGAUGAUUCAAA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260