Stem-loop sma-mir-8404

Accession

MI0027195

Description

Schistosoma mansoni sma-mir-8404 precursor miRNA

Sequence

uaacauuggcgaagguauGUACGUUGAUUUAUUUUGAUugauaguuuuuguagaacccuuaugucucuucuuaauacucaaaguuuuAAUUUUGUAAUGUACUAACCUugcucaacgaua
.....(((((.(((((..((((((((....(((..((((...(((((..(.(((((......)).))).)..)).)))...))))..)))....))))))))..))))))).))).....

Structure

uaaca   -  g     au        AUUU   UU    gau   -  uu u   -  cc 
     uug gc aaggu  GUACGUUG    AUU  GAUu   agu uu  g aga ac  u
     ||| || |||||  ||||||||    |||  ||||   ||| ||  | ||| ||   
     aac cg uUCCA  CAUGUAAU    UAA  uuga   uca aa  c ucu ug  u
auagc   u  -     AU        GUUU   uu    aac   u  uu u   c  ua 

Annotation confidence Not enough data

Genome context

Chr_1: 31453533-31453652 [-]

Mature sma-miR-8404-5p

• Accession: MIMAT0033508
• Description: Schistosoma mansoni sma-miR-8404-5p mature miRNA
• Sequence: 19 - GUACGUUGAUUUAUUUUGAU - 38
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8404-3p

• Accession: MIMAT0033509
• Description: Schistosoma mansoni sma-miR-8404-3p mature miRNA
• Sequence: 88 - AAUUUUGUAAUGUACUAACCU - 108
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402