Stem-loop sma-mir-8409

Accession

MI0027202

Description

Schistosoma mansoni sma-mir-8409 precursor miRNA

Sequence

cagaauaugggcaaucaggaaaUAGCUAGUUACAAAAGGUUaccuaauaguucacguacucugucuguuagugUAAUCGCUUUGCGUUCGUCgacaauuugcucauagacac
..(..((((((((((((.(((...((.(((.......(((((((((((((..((.(....))).))))))).)))))))))..)).))).).))....)))))))))..)..

Structure

ca aa         ----  - g   aUA  -U   UACAAAA      -       uu  c u 
  g  uaugggcaa    uc a gaa   GC  AGU       GGUUac cuaauag  ca g a
  |  |||||||||    || | |||   ||  |||       |||||| |||||||  || |  
  c  auacucguu    ag U CUU   CG  UCG       CUAAUg gauuguc  gu c c
ca ag         uaac  C G   --G  UU   -------      u       -u  - u 

Annotation confidence Not enough data

Genome context

Chr_1: 24036305-24036416 [+]

Mature sma-miR-8409-5p

• Accession: MIMAT0033522
• Description: Schistosoma mansoni sma-miR-8409-5p mature miRNA
• Sequence: 23 - UAGCUAGUUACAAAAGGUU - 41
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8409-3p

• Accession: MIMAT0033523
• Description: Schistosoma mansoni sma-miR-8409-3p mature miRNA
• Sequence: 74 - UAAUCGCUUUGCGUUCGUC - 92
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402