Stem-loop sma-mir-8410

Accession

MI0027203

Description

Schistosoma mansoni sma-mir-8410 precursor miRNA

Sequence

gcuuAAUGGAAAUAGUUUUUUCUCacacacugguuuacauuuauucacugucucauaaaaugauaugaaauugaauagucgaauaauaugugcAGUGUUUGUAGUUAUUCCAUauauc
.....((((((.(((......((((.((((((...((((((((((((((((((((((......)))))....).))))).)))))).))))))))))).)).))))))))))).....

Structure

gcuuA      A   UUUUUU  -  c      guu     -      -     - ----     aa 
     AUGGAA UAG      CU Ca acacug   uacau uuauuc acugu c    ucaua  a
     |||||| |||      || || ||||||   ||||| |||||| ||||| |    |||||   
     UACCUU AUU      GA GU UGUGAc   gugua aauaag ugaua g    aguau  u
cuaua      -   ------  U  U      ---     u      c     a uuaa     ag 

Annotation confidence Not enough data

Genome context

Chr_1: 26160408-26160525 [+]

Mature sma-miR-8410-5p

• Accession: MIMAT0033524
• Description: Schistosoma mansoni sma-miR-8410-5p mature miRNA
• Sequence: 5 - AAUGGAAAUAGUUUUUUCUC - 24
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8410-3p

• Accession: MIMAT0033525
• Description: Schistosoma mansoni sma-miR-8410-3p mature miRNA
• Sequence: 94 - AGUGUUUGUAGUUAUUCCAU - 113
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402