Stem-loop sma-mir-8418

Accession

MI0027211

Description

Schistosoma mansoni sma-mir-8418 precursor miRNA

Sequence

uaccaaaguaaauuaacauauUCAUUUUGUAUAAUUGCGAuuguucccugaaucauguuagucagauuucgggaaacguuauCUAAGUAAUUAUAUGAUGAAgauguuuucaaaugaaacuuaaguc
.....((((..((((((((.((((((..(((((((((((((..(((((.(((((.((.....))))))).))))).....)))...)))))))))))))))).)))))....)))...)))).....

Structure

uacca    -aa   ----     a      UU          ---   ---ug     u     a  u 
     aagu   auu    aacau uUCAUU  GUAUAAUUGC   GAu     uuccc gaauc ug u
     ||||   |||    ||||| ||||||  ||||||||||   |||     ||||| ||||| || a
     uuca   uaa    uugua AAGUAG  UAUAUUAAUG   Cua     aaggg uuuag ac g
cugaa    aag   acuu     g      --          AAU   uugca     c     -  u 

Annotation confidence Not enough data

Genome context

Chr_1.unplaced.SC_0076: 419395-419521 [+]

Mature sma-miR-8418-5p

• Accession: MIMAT0033540
• Description: Schistosoma mansoni sma-miR-8418-5p mature miRNA
• Sequence: 22 - UCAUUUUGUAUAAUUGCGA - 40
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8418-3p

• Accession: MIMAT0033541
• Description: Schistosoma mansoni sma-miR-8418-3p mature miRNA
• Sequence: 83 - CUAAGUAAUUAUAUGAUGAA - 102
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402