Stem-loop sma-mir-8419

Accession

MI0027212

Description

Schistosoma mansoni sma-mir-8419 precursor miRNA

Sequence

acuaaguucuuuaucaUUUGACCGAGUUAUAAAGGuagauugugaucaacuguucaauauauuugaugacauuucacaauuuggucacauucauUCCUUAUUUCCUCUUAAAAAAagaacaugac
.....(((((((....(((((..(((.....((((..((.(((((((((.(((((((.....)))).........)))..))))))))).))...)))).....)))))))).))))))).....

Structure

acuaa       auca     CC   UUAUA    -ua  u         -c   ---------    u 
     guucuuu    UUUGA  GAG     AAGG   ga ugugaucaa  ugu         ucaa a
     |||||||    |||||  |||     ||||   || |||||||||  |||         |||| u
     caagaAA    AAAUU  CUC     UUCC   cu acacugguu  aca         aguu a
cagua       ---A     --   CUUUA    Uua  u         ua   cuuuacagu    u 

Annotation confidence Not enough data

Genome context

Chr_1.unplaced.SC_0094: 781602-781726 [-]

Mature sma-miR-8419-5p

• Accession: MIMAT0033542
• Description: Schistosoma mansoni sma-miR-8419-5p mature miRNA
• Sequence: 17 - UUUGACCGAGUUAUAAAGG - 35
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8419-3p

• Accession: MIMAT0033543
• Description: Schistosoma mansoni sma-miR-8419-3p mature miRNA
• Sequence: 95 - UCCUUAUUUCCUCUUAAAAAA - 115
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402