miRBase entry: sma-mir-8422

Stem-loop sma-mir-8422


Accession
MI0027215
Description
Schistosoma mansoni sma-mir-8422 precursor miRNA


Sequence

guguucuaagucguaacaaaaaugcGCAAUUAAAAGUAGCAGUGauaauuauaaagaaaUUAGGACUUUUAUUGGUUAAuagcugaguaaagauagacgacuuaggucgg
.((.((((((((((........(((((.(((((.(((((.(((..(((((.......)))))..))).)))))..))))).))...))).......)))))))))).)).

Structure
g  u          aacaaaaa   ---  A     -A     C   Ga     au 
 ug ucuaagucgu        ugc   GC AUUAA  AGUAG AGU  uaauu  a
 || ||||||||||        |||   || |||||  ||||| |||  |||||  a
 gc ggauucagca        aug   cg uAAUU  UUAUU UCA  AUUaa  a
g  u          -gauagaa   agu  a     GG     U   GG     ag 


Annotation confidence Not enough data
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Genome context
Chr_2: 12543004-12543113 [-]

Database links

Mature sma-miR-8422-5p

Accession MIMAT0033548
Description Schistosoma mansoni sma-miR-8422-5p mature miRNA
Sequence 26 - GCAAUUAAAAGUAGCAGUG - 44
Evidence experimental
SOLiD [1]

Mature sma-miR-8422-3p

Accession MIMAT0033549
Description Schistosoma mansoni sma-miR-8422-3p mature miRNA
Sequence 60 - UUAGGACUUUUAUUGGUUAA - 79
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 24069470
    Sex-biased expression of microRNAs in Schistosoma mansoni
    Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
    PLoS Negl Trop Dis (2013) 7:e2402