miRBase entry: sma-mir-8424

Stem-loop sma-mir-8424


Accession
MI0027217
Description
Schistosoma mansoni sma-mir-8424 precursor miRNA


Sequence

ucucugcuuacuaaguaucuugauuguuuguuuuagugaauuuagccGUCAACUGAUAAUAUUUCCAUaguuuuguacuagcaauacuauggAAACGUUUUCGAAUAAGGUucuuaaauuccuauccuagucagugaguguauu
.....(((((((.........(((((.......(((.((((((((((......(((.(((.((((((((((.((((....)))).)))))))))).))).))).....)))...))))))))))...)))))))))))).....

Structure
ucucu       aaguaucuu     uuuguuu   u       ---   GUCAAC   U   A          u    a 
     gcuuacu         gauug       uag gaauuua   gcc      UGA AAU UUUCCAUagu uugu c
     |||||||         |||||       ||| |||||||   |||      ||| ||| |||||||||| ||||  
     ugaguga         cugau       auc cuuaaau   UGG      GCU UUG AAAgguauca aacg u
uuaug       ---------     ----ccu   -       ucu   -AAUAA   U   C          u    a 


Annotation confidence Not enough data
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Genome context
Chr_2: 29715638-29715781 [-]

Database links

Mature sma-miR-8424-5p

Accession MIMAT0033552
Description Schistosoma mansoni sma-miR-8424-5p mature miRNA
Sequence 48 - GUCAACUGAUAAUAUUUCCAU - 68
Evidence experimental
SOLiD [1]

Mature sma-miR-8424-3p

Accession MIMAT0033553
Description Schistosoma mansoni sma-miR-8424-3p mature miRNA
Sequence 93 - AAACGUUUUCGAAUAAGGU - 111
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 24069470
    Sex-biased expression of microRNAs in Schistosoma mansoni
    Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
    PLoS Negl Trop Dis (2013) 7:e2402