Stem-loop sma-mir-8434

Accession

MI0027227

Description

Schistosoma mansoni sma-mir-8434 precursor miRNA

Sequence

cucgcagccauuaagugauaaaguguaGACUAUACCAUAGGAAGCUcgaguguuuaccuccGUUUCAUGUGAUAUAGGUUAAuaaaugucaguuaagcuuucug
.....(((..((((.(((((.....((..(((((.((((.(((((..(((.......))).))))).)))).)))))..)).....))))).))))))).....

Structure

cucgc   ca    g     aagug  GA     C    G     Uc   ug 
     agc  uuaa ugaua     ua  CUAUA CAUA GAAGC  gag  u
     |||  |||| |||||     ||  ||||| |||| |||||  |||  u
     ucg  aauu acugu     AU  GAUAU GUGU CUUUG  cuc  u
gucuu   --    g     aaauA  UG     A    A     -c   ca 

Annotation confidence Not enough data

Genome context

Chr_3: 24061113-24061216 [-]

Mature sma-miR-8434-5p

• Accession: MIMAT0033572
• Description: Schistosoma mansoni sma-miR-8434-5p mature miRNA
• Sequence: 28 - GACUAUACCAUAGGAAGCU - 46
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8434-3p

• Accession: MIMAT0033573
• Description: Schistosoma mansoni sma-miR-8434-3p mature miRNA
• Sequence: 62 - GUUUCAUGUGAUAUAGGUUAA - 82
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402