Stem-loop sma-mir-8441

Accession

MI0027234

Description

Schistosoma mansoni sma-mir-8441 precursor miRNA

Sequence

guaaaggugguccucacucguuucuacuuauCGUAAGUCGCAGUAUUCCGgaaauuuuuagggugaaaguaaauuucAAUACUUUUUGUUAUCAUAAguaaccaguguuuauacuaucaucgg
.....((((((...((((.((...(((((((.((((.....((((((...(((((((.............))))))))))))).....)))).))))))))).)))).....)))))).....

Structure

guaaa      --ccu    c  uuc       C    GUCGC      CCG       uuagg 
     gguggu     cacu gu   uacuuau GUAA     AGUAUU   gaaauuu     g
     ||||||     |||| ||   ||||||| ||||     ||||||   |||||||     u
     cuauca     guga ca   augAAUA UAUU     UCAUAA   cuuuaaa     g
ggcua      uauuu    c  ---       C    GUUUU      ---       ugaaa 

Annotation confidence Not enough data

Genome context

Chr_4: 8081742-8081864 [-]

Mature sma-miR-8441-5p

• Accession: MIMAT0033586
• Description: Schistosoma mansoni sma-miR-8441-5p mature miRNA
• Sequence: 32 - CGUAAGUCGCAGUAUUCCG - 50
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8441-3p

• Accession: MIMAT0033587
• Description: Schistosoma mansoni sma-miR-8441-3p mature miRNA
• Sequence: 78 - AAUACUUUUUGUUAUCAUAA - 97
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402