Stem-loop sma-mir-8446

Accession

MI0027242

Description

Schistosoma mansoni sma-mir-8446 precursor miRNA

Sequence

uaagcccaggaaauccauccgguccuuguguacccaUUUGACCAACUGGGCCUUGagcaccagguaaUCCAGUUGGUCCUUUAGGUccagguggaccaaauggaccuggaaggc
.....(((((...(((((..(((((.(.((.(((.....(((((((((((.((((.....))))...))))))))))).....))).)).).)))))..)))))))))).....

Structure

uaagc     aaa     cc     u g  u   caUUU           --C    a 
     ccagg   uccau  ggucc u ug acc     GACCAACUGGG   CUUG g
     |||||   |||||  ||||| | || |||     |||||||||||   |||| c
     ggucc   aggua  ccagg g ac UGG     CUGGUUGACCU   ggac a
cggaa     ---     aa     u g  c   AUUUC           aau    c 

Annotation confidence Not enough data

Genome context

Chr_4: 21655213-21655326 [+]

Mature sma-miR-8446-5p

• Accession: MIMAT0033602
• Description: Schistosoma mansoni sma-miR-8446-5p mature miRNA
• Sequence: 37 - UUUGACCAACUGGGCCUUG - 55
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8446-3p

• Accession: MIMAT0033603
• Description: Schistosoma mansoni sma-miR-8446-3p mature miRNA
• Sequence: 68 - UCCAGUUGGUCCUUUAGGU - 86
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402