miRBase entry: sma-mir-8452

Stem-loop sma-mir-8452


Accession
MI0027248
Description
Schistosoma mansoni sma-mir-8452 precursor miRNA


Sequence

uaauauugaaugguuuauuaguaaagcgaauuuuugaauACCUAUCGCCAUAUAAGGUuuuuaauuUUAUAGUCGGAAGGCCUUCCgaauuucgugauaaaugaaauuuaaa
.....((((((.(((((((......(((((.(((.(((..(((.(((.(.(((((((((...)))))))))).))).)))..))).))).))))))))))))...)))))).

Structure
uaaua      --g       aguaaa     u   u   uA   A   C A         u 
     uugaau   guuuauu      gcgaa uuu gaa  CCU UCG C UAUAAGGUu  
     ||||||   |||||||      ||||| ||| |||  ||| ||| | ||||||||| u
     aauuua   uaaauag      ugcuu aag CUU  GGA GGC G AUAUUuuaa  
----a      aag       ------     u   C   CC   A   U -         u 


Annotation confidence Not enough data
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Genome context
Chr_6: 12230644-12230755 [+]

Database links

Mature sma-miR-8452-5p

Accession MIMAT0033614
Description Schistosoma mansoni sma-miR-8452-5p mature miRNA
Sequence 40 - ACCUAUCGCCAUAUAAGGU - 58
Evidence experimental
SOLiD [1]

Mature sma-miR-8452-3p

Accession MIMAT0033615
Description Schistosoma mansoni sma-miR-8452-3p mature miRNA
Sequence 67 - UUAUAGUCGGAAGGCCUUCC - 86
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 24069470
    Sex-biased expression of microRNAs in Schistosoma mansoni
    Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
    PLoS Negl Trop Dis (2013) 7:e2402