miRBase entry: sma-mir-8453

Stem-loop sma-mir-8453


Accession
MI0027249
Description
Schistosoma mansoni sma-mir-8453 precursor miRNA


Sequence

ucuuaauauguaacacaaaaauuagagauAUAAAUUAGUUGAUAAGGUuguAAACUUUUGUCAACUAAGGugaauaaucuuuguguuauguaucucua
.....((((((((((((((.((((..........(((((((((((((((...))).))))))))))))......)))).)))))))))))))).....

Structure
ucuua              a    gagauAUAAA            -   g 
     auauguaacacaaa auua          UUAGUUGAUAAG GUu  
     |||||||||||||| ||||          |||||||||||| ||| u
     uauguauuguguuu uaau          AAUCAACUGUUU CAA  
aucuc              c    ----aaguGG            U   A 


Annotation confidence Not enough data
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Genome context
Chr_6: 13196108-13196205 [+]

Database links

Mature sma-miR-8453-5p

Accession MIMAT0033616
Description Schistosoma mansoni sma-miR-8453-5p mature miRNA
Sequence 30 - AUAAAUUAGUUGAUAAGGU - 48
Evidence experimental
SOLiD [1]

Mature sma-miR-8453-3p

Accession MIMAT0033617
Description Schistosoma mansoni sma-miR-8453-3p mature miRNA
Sequence 52 - AAACUUUUGUCAACUAAGG - 70
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 24069470
    Sex-biased expression of microRNAs in Schistosoma mansoni
    Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
    PLoS Negl Trop Dis (2013) 7:e2402