Stem-loop sma-mir-8459

Accession

MI0027258

Description

Schistosoma mansoni sma-mir-8459 precursor miRNA

Literature search

1 open access papers mention sma-mir-8459
(1 sentences)

Sequence

cuuuacauugccagguuuauuacguguaaUAACGAAGACUAGUGGUCUUcaggaugaauuucUUGGAAUAAUACGUGUAUUcggcaaucuuacacggcauacagcaauaaggcaaugguuag
.....(((((((..((((((..(((((((...((((.((..(((...(((((((......)))))))....)))..)).))))......)))))))..))).))).....))))))).....

Structure

cuuua       ---ag   -   ua       ---UAA    G  UA   -GUC       ug 
     cauugcc     guu uau  cguguaa      CGAA AC  GUG    UUcagga  a
     |||||||     ||| |||  |||||||      |||| ||  |||    |||||||   
     guaacgg     cga aua  gcacauu      gcUU UG  CAU    AGGUUcu  a
gauug       aauaa   c   cg       cuaacg    A  UG   AAUA       uu 

Annotation confidence Not enough data

Genome context

Chr_W: 9705928-9706049 [-]

Mature sma-miR-8459-5p

• Accession: MIMAT0033633
• Description: Schistosoma mansoni sma-miR-8459-5p mature miRNA
• Sequence: 30 - UAACGAAGACUAGUGGUCUU - 49
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8459-3p

• Accession: MIMAT0033634
• Description: Schistosoma mansoni sma-miR-8459-3p mature miRNA
• Sequence: 63 - UUGGAAUAAUACGUGUAUU - 81
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402