Stem-loop sma-mir-8460

Accession

MI0027260

Description

Schistosoma mansoni sma-mir-8460 precursor miRNA

Sequence

ucaaauagugaugauucgcaaaagguugaaagUAAUUAUAUUAUAUUUAUAAuauuuauguugaccuuauuuuccaaaugagaggauauaaugauaaacaCGUGGAGAUUAAUAUAAACAuuuuuauucauuugcuuacugggaua
.....((((((......(((((.((.(((((((..((((((((..(((((.((..(((((((...(((((((...)))))))..)))))))..))......)))))...))))))))..))))))).)).))))))))))).....

Structure

ucaaa      ugauuc     a  u       AA        -UA     -----A  au       gac       u 
     uaguga      gcaaa gg ugaaagU  UUAUAUUA   UUUAU      Au  uuauguu   cuuauuu  
     ||||||      ||||| || |||||||  ||||||||   |||||      ||  |||||||   ||||||| c
     gucauu      cguuu cu auuuuuA  AAUAUAAU   AGGUG      ua  aauauag   gaguaaa  
auagg      ------     a  u       CA        UAG     Cacaaa  gu       -ga       c 

Annotation confidence Not enough data

Genome context

Chr_W: 17240505-17240650 [-]

Mature sma-miR-8460-5p

• Accession: MIMAT0033637
• Description: Schistosoma mansoni sma-miR-8460-5p mature miRNA
• Sequence: 33 - UAAUUAUAUUAUAUUUAUAA - 52
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8460-3p

• Accession: MIMAT0033638
• Description: Schistosoma mansoni sma-miR-8460-3p mature miRNA
• Sequence: 101 - CGUGGAGAUUAAUAUAAACA - 120
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402