miRBase entry: sma-mir-8471

Stem-loop sma-mir-8471


Accession
MI0027272
Description
Schistosoma mansoni sma-mir-8471 precursor miRNA


Sequence

uuguuguuguuguuagucuuguuguGUUAAUAUGGUAUGGCAACacaucuGUGCCAGGCUAUGCGUUAGCGgcaacugacugguaacugacucu
.....(((((((((((((..((((((((((((((((.(((((.((....))))))).)))))..)))))).))))).)))))))))).)))...

Structure
uuguu   -          uu     -      --     A     A  c 
     guu guuguuaguc  guugu GUUAAU  AUGGU UGGCA Ca a
     ||| ||||||||||  ||||| ||||||  ||||| ||||| ||  
     cag caauggucag  caacg CGAUUG  UAUCG ACCGU Gu u
--ucu   u          -u     G      CG     G     -  c 


Annotation confidence Not enough data
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Genome context
SC_0013: 2481279-2481372 [-]

Database links

Mature sma-miR-8471-5p

Accession MIMAT0033661
Description Schistosoma mansoni sma-miR-8471-5p mature miRNA
Sequence 26 - GUUAAUAUGGUAUGGCAAC - 44
Evidence experimental
SOLiD [1]

Mature sma-miR-8471-3p

Accession MIMAT0033662
Description Schistosoma mansoni sma-miR-8471-3p mature miRNA
Sequence 51 - GUGCCAGGCUAUGCGUUAGCG - 71
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 24069470
    Sex-biased expression of microRNAs in Schistosoma mansoni
    Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
    PLoS Negl Trop Dis (2013) 7:e2402