Stem-loop sma-mir-8473

Accession

MI0027275

Description

Schistosoma mansoni sma-mir-8473 precursor miRNA

Sequence

uauggcaaaaaggAACCAAGUAACAAUAAAAUugaauaaacaaaaaauuguaucccgauuucuguaguuuguaauacaguuuguggauuuauuauaagaaagaaUGAUUCAAUGAUAAGGUUCcuuuuugguga
...(.((((((((((((.....(((((....(((......)))...)))))(((((((...(((((........))))).))).))))(((((((..(((.......))).))))))))))))))))))).)..

Structure

uau g            AAGUAACAAUAAAAUugaauaaacaaaaaauuguaucccgauuucuguaguuuguaauacaguuuguggau       aa   ag 
   g caaaaaggAACC                                                                       uuauuau  gaa  a
   | ||||||||||||                                                                       |||||||  |||  a
   u guuuuucCUUGG                                                                       AAUAGUA  CUU  U
-ag g            -----------------------------------------------------------------------       -A   AG 

Annotation confidence Not enough data

Genome context

SC_0049: 667482-667615 [+]

Mature sma-miR-8473-5p

• Accession: MIMAT0033667
• Description: Schistosoma mansoni sma-miR-8473-5p mature miRNA
• Sequence: 14 - AACCAAGUAACAAUAAAAU - 32
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8473-3p

• Accession: MIMAT0033668
• Description: Schistosoma mansoni sma-miR-8473-3p mature miRNA
• Sequence: 105 - UGAUUCAAUGAUAAGGUUC - 123
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402