miRBase entry: sma-mir-8479

Stem-loop sma-mir-8479


Accession
MI0027281
Description
Schistosoma mansoni sma-mir-8479 precursor miRNA


Sequence

uaauggcauuuagcucuacuuaggaauagccagcuggauuuaucuggauCCCAGUGUUGAUAUUCAUUUUgggacaugaaagauugaugaugcuucgguccgUGAUAUCGAAUAUGGGAUAauucgaaucauuucagugagauccuaaauaaaguauguauuuu
.....((((...(((.((.((((((.......(((((((((......((((((...(((((((.(((....((((.((((..(((...)))..))))))))))))))))))...)))))).....)))))....))))....)))))).)).))))))).....

Structure
uaaug    uua   c  c      auagcca    ----     aucugg      GUG       U   UUUg    a    ag   g 
     gcau   gcu ua uuagga       gcug    gauuu      auCCCA   UUGAUAU CAU    ggac ugaa  auu  
     ||||   ||| || ||||||       ||||    |||||      ||||||   ||||||| |||    |||| ||||  ||| a
     ugua   uga au aauccu       ugac    cuaag      UAGGGU   AGCUAUA GUg    ccug gcuu  uag  
uuuua    ---   a  a      ---agag    uuua     -cuuaA      AUA       -   ----    -    cg   u 


Annotation confidence Not enough data
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Genome context
SC_0151: 324307-324470 [-]

Database links

Mature sma-miR-8479-5p

Accession MIMAT0033679
Description Schistosoma mansoni sma-miR-8479-5p mature miRNA
Sequence 50 - CCCAGUGUUGAUAUUCAUUUU - 70
Evidence experimental
SOLiD [1]

Mature sma-miR-8479-3p

Accession MIMAT0033680
Description Schistosoma mansoni sma-miR-8479-3p mature miRNA
Sequence 103 - UGAUAUCGAAUAUGGGAUA - 121
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 24069470
    Sex-biased expression of microRNAs in Schistosoma mansoni
    Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
    PLoS Negl Trop Dis (2013) 7:e2402