miRBase entry: pxy-mir-8493

Stem-loop pxy-mir-8493


Accession
MI0027296
Description
Plutella xylostella pxy-mir-8493 precursor miRNA


Sequence

9 reads, 431 reads per million, 4 experiments
aauaguucuuuagugaugcuccugaaauucauagaauuucaacUACGAAAUUCAGCAGCAUCACUcuagaucucau
...((.(((..(((((((((.(((((.(((.(((........))).))).))))).)))))))))..))).))...

Structure
aau  u   uu         c     a   a   aau 
   ag ucu  agugaugcu cugaa uuc uag   u
   || |||  ||||||||| ||||| ||| |||    
   uc aga  UCACUACGA GACUU AAG AUc   u
uac  u   uc         C     A   C   aac 


Annotation confidence Not enough data
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Genome context
scaffold_127: 944000-944075 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from pxy-mir-8493
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pxy-miR-8493

Accession MIMAT0033701
Description Plutella xylostella pxy-miR-8493 mature miRNA
Sequence 44 - UACGAAAUUCAGCAGCAUCACU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787