Stem-loop pxy-bantam

Accession

MI0027317

Description

Plutella xylostella pxy-bantam precursor miRNA

Literature search

2 open access papers mention pxy-bantam
(4 sentences)

Sequence

auguagaucccgugacucggggucauugacaugaugacaguucauuuguacuuguaaugucgaguguuagguacccgacgUGAGAUCAUGGUGAAAucugagu
...((((((((((((((((((((..(((((((..(((((...((........))...))))).)))))))..))))....)))).)))))).))..))))...

Structure

aug    --  -      -    ----    ca       ga     guu  uuu 
   uaga  uc ccguga cucg    gggu  uugacau  ugaca   ca   g
   ||||  || |||||| ||||    ||||  |||||||  |||||   ||    
   gucu  AG GGUACU GAGU    ccca  gauugug  gcugu   gu   u
uga    AA  U      A    gcag    ug       -a     aau  uca 

Annotation confidence Not enough data

Genome context

scaffold_65: 788658-788760 [-]

Mature pxy-bantam

• Accession: MIMAT0033726
• Description: Plutella xylostella pxy-bantam mature miRNA
• Sequence: 81 - UGAGAUCAUGGUGAAA - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787