Stem-loop sequence pxy-mir-8508

Accession

MI0027319 (change log)

Description

Plutella xylostella miR-8508 stem-loop

Stem-loop

   ----------------------------------------auugauauuuguuuauua       cc    a             a aau 
5'                                                           aaugaga  uggc uaaagauaaaaau c   u
                                                             |||||||  |||| ||||||||||||| |    
3'                                                           uuauuuu  aucg auuucuauuuuua g   u
   acuaucaaacuauuacccugugucauugucacuuucaauacuaucgcuauguuuuaaa       --    a             a aaa 

Deep sequencing

377 reads, 9.8e+03 reads per million, 4 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (1.0): scaffold_133: 529907-530046 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0027319

Mature sequence pxy-miR-8508

• Accession: MIMAT0033728
• Sequence: 20 - augagaccuggcauaaagauaaaa - 43
• Deep sequencing: 361 reads, 4 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:24236051 "Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)" Liang P, Feng B, Zhou X, Gao X PLoS One. 8:e78787(2013).