miRBase entry: pxy-mir-8509

Stem-loop pxy-mir-8509


Accession
MI0027322
Description
Plutella xylostella pxy-mir-8509 precursor miRNA


Sequence

45 reads, 1116 reads per million, 4 experiments
caagccaaaacucccggaucgguuUAUAAAUCCUCUUUUGCACUGAaugggcaugcucaguggaaaagaggaucuguagaucgauccggguaugcgcaac
...((((.....((((((((((((((((.((((((((((.((((((..........)))))).)))))))))).))))))))))))))))..)).))...

Structure
caa  -  aaacu                A          G      augg 
   gc ca     cccggaucgguuUAUA AUCCUCUUUU CACUGA    g
   || ||     |||||||||||||||| |||||||||| ||||||     
   cg gu     gggccuagcuagaugu uaggagaaaa gugacu    c
caa  c  ---au                c          g      cgua 


Annotation confidence Not enough data
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Genome context
scaffold_89: 839301-839400 [-]

Database links

Mature pxy-miR-8509

Accession MIMAT0033731
Description Plutella xylostella pxy-miR-8509 mature miRNA
Sequence 25 - UAUAAAUCCUCUUUUGCACUGA - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787