miRBase entry: pxy-mir-8510b

Stem-loop pxy-mir-8510b


Accession
MI0027325
Description
Plutella xylostella pxy-mir-8510b precursor miRNA
Gene family
MIPF0001886; mir-8510


Sequence

95 reads, 4579 reads per million, 4 experiments
caagcgguggucuguucucgucgauACUGUGAUCUCACCCGCAAGUcggucgugcacUCGCAGGUGAGAUGAUAGCAUcgaagggaggagcggcaaccacgcacu
...(((.((((((.(((((.(((((.((((.((((((((.((.(((((....)).))).)).)))))))).)))).))))).))))).)).....)))))))...

Structure
caa   g    -----  g     g     A    G        C  A   -  g 
   gcg uggu     cu uucuc ucgau CUGU AUCUCACC GC AGU cg u
   ||| ||||     || ||||| ||||| |||| |||||||| || ||| ||  
   cgc acca     ga gaggg agcUA GAUA UAGAGUGG CG Uca gu c
uca   -    acggc  g     a     C    G        A  C   c  g 


Annotation confidence High
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Genome context
scaffold_858: 943-1047 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pxy-mir-8510b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pxy-miR-8510b-5p

Accession MIMAT0033734
Description Plutella xylostella pxy-miR-8510b-5p mature miRNA
Sequence 26 - ACUGUGAUCUCACCCGCAAGU - 46
Evidence experimental
Illumina [1]

Mature pxy-miR-8510b-3p

Accession MIMAT0033735
Description Plutella xylostella pxy-miR-8510b-3p mature miRNA
Sequence 58 - UCGCAGGUGAGAUGAUAGCAU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787