miRBase entry: pxy-mir-8521a-3

Stem-loop pxy-mir-8521a-3


Accession
MI0027341
Description
Plutella xylostella pxy-mir-8521a-3 precursor miRNA
Gene family
MIPF0001871; mir-8521


Sequence

29 reads, 1942 reads per million, 4 experiments
cgcggcagucagaauucgggacaagcccggggcggucgCUUGUCCCGAAUUUUGACUCUGCCaaa
.((((.(((((((((((((((((((((((...)))..))))))))))))))))))))))))....

Structure
---c    c                    --   g 
    gcgg agucagaauucgggacaagc  ccg  
    |||| ||||||||||||||||||||  ||| g
    CGUC UCAGUUUUAAGCCCUGUUCg  ggc  
aaaC    -                    cu   g 


Annotation confidence Not enough data
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Genome context
scaffold_127: 917960-918024 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from pxy-mir-8521a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pxy-miR-8521a

Accession MIMAT0033752
Description Plutella xylostella pxy-miR-8521a mature miRNA
Sequence 39 - CUUGUCCCGAAUUUUGACUCUGCC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787