miRBase entry: pxy-mir-8521b-11

Stem-loop pxy-mir-8521b-11


Accession
MI0027345
Description
Plutella xylostella pxy-mir-8521b-11 precursor miRNA
Gene family
MIPF0001871; mir-8521


Sequence

50 reads, 2321 reads per million, 4 experiments
cguuuuugucucuggcgcgucagucagaauucgggacaagcccggaguggucgCUUGUCCCGAAUUUUGACUCGGCCaaaucaaaacca
.(.(((((....((((.((..((((((((((((((((((((((.....))..))))))))))))))))))))))))))...))))).).

Structure
c u     ucuc    g  uc                    --  g 
 g uuuug    uggc cg  agucagaauucgggacaagc  cc g
 | |||||    |||| ||  ||||||||||||||||||||  || a
 c aaaac    aCCG GC  UCAGUUUUAAGCCCUGUUCg  gg g
a c     -uaa    -  --                    cu  u 


Annotation confidence Not enough data
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Genome context
scaffold_127: 921914-922002 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from pxy-mir-8521b-11
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pxy-miR-8521b

Accession MIMAT0033751
Description Plutella xylostella pxy-miR-8521b mature miRNA
Sequence 54 - CUUGUCCCGAAUUUUGACUCGGCC - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787