Stem-loop pxy-mir-8517b

Accession

MI0027346

Description

Plutella xylostella pxy-mir-8517b precursor miRNA

Gene family

MIPF0002077; mir-8517

Literature search

1 open access papers mention pxy-mir-8517b
(1 sentences)

Sequence

223 reads, 4032 reads per million, 4 experiments

cuaacccccuuauucauaaaaaaguuacugaacggauUAACUAUUGAACUGUUCUGUCAAAcaauuuguucuuugacagagagugacaaaacaguucaauagcuaauccguccaguaacuuuuuuaugaauaaggggguaag
...(((((((((((((((((((((((((((.((((((((.(((((((((((((.(((((.....((((((....))))))...))))).))))))))))))).)))))))).)))))))))))))))))))))))))))...

Structure

cua                           a        A             C     AAcaa      c 
   acccccuuauucauaaaaaaguuacug acggauUA CUAUUGAACUGUU UGUCA     uuuguu u
   ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||     ||||||  
   ugggggaauaaguauuuuuucaaugac ugccuaau gauaacuugacaa acagu     agacag u
gaa                           c        c             a     --gag      u 

Annotation confidence Not enough data

Genome context

scaffold_143: 400674-400815 [+]

Mature pxy-miR-8517b

• Accession: MIMAT0033754
• Description: Plutella xylostella pxy-miR-8517b mature miRNA
• Sequence: 38 - UAACUAUUGAACUGUUCUGUCAAA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787