miRBase entry: pxy-mir-8519

Stem-loop pxy-mir-8519


Accession
MI0027352
Description
Plutella xylostella pxy-mir-8519 precursor miRNA

Literature search
1 open access papers mention pxy-mir-8519
(25 sentences)

Sequence

5 reads, 306 reads per million, 2 experiments
cugugucuaaaaauuaAAAAUGUAAUGAUUUCAGAAacuaaugcuacaguacaaugugccugcugaaacauuucugacaauuguuauauuuuuguuuuuuugggugguu
.....((((((((.(((((((((((((((((((((((......(..((((((...))).)))..).....))))))).))))))))))))))))..)))))))).....

Structure
cugug        -u                -       cuaaug ua   -   a 
     ucuaaaaa  uaAAAAUGUAAUGAUU UCAGAAa      c  cag uac  
     ||||||||  |||||||||||||||| |||||||      |  ||| ||| a
     ggguuuuu  guuuuuauauuguuaa agucuuu      g  guc gug  
uuggu        uu                c       -acaaa uc   c   u 


Annotation confidence Not enough data
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Genome context
scaffold_574: 179907-180015 [-]

Database links

Mature pxy-miR-8519

Accession MIMAT0033757
Description Plutella xylostella pxy-miR-8519 mature miRNA
Sequence 17 - AAAAUGUAAUGAUUUCAGAA - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787