Stem-loop sequence pxy-mir-8500

Accession

MI0027354 (change log)

Description

Plutella xylostella miR-8500 stem-loop

Stem-loop

   cuu        a        aau       a           a          cuau     ug    u            ca 
5'    aggcugcc guccacca   cggagug gcuagcggagc gugugcgaag    aaucg  caau gaauugcaugag  g
      |||||||| ||||||||   ||||||| ||||||||||| ||||||||||    |||||  |||| ||||||||||||  a
3'    uccgacgg cagguggu   gccucac cgaucgucucg cacacguuuc    uuagu  guug uuuaacguauuu  g
   uau        a        cuc       c           c          -acu     ug    c            uu 

Deep sequencing

9 reads, 450 reads per million, 2 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (1.0): scaffold_622: 176059-176226 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0027354

Mature sequence pxy-miR-8500

• Accession: MIMAT0033760
• Sequence: 92 - augcaauuucguugguugau - 111
• Deep sequencing: 9 reads, 2 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:24236051 "Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)" Liang P, Feng B, Zhou X, Gao X PLoS One. 8:e78787(2013).