Stem-loop sequence pxy-mir-8531

Accession

MI0027369 (change log)

Description

Plutella xylostella miR-8531 stem-loop

Stem-loop

   ggu  u    -       --u  - a  -      -----ga       cag 
5'    uc cagc cugcauc   cc c gu gugacg       ucuaugu   a
      || |||| |||||||   || | || ||||||       |||||||   u
3'    ag guug ggcgugg   gg g ca cacugu       agauaca   a
   guu  u    c       cau  u g  u      auucaug       auu 

Deep sequencing

25 reads, 750 reads per million, 4 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (1.0): scaffold_240: 358716-358812 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0027369

Mature sequence pxy-miR-8531

• Accession: MIMAT0033774
• Sequence: 79 - cggugcggcguugug - 93
• Deep sequencing: 22 reads, 4 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:24236051 "Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)" Liang P, Feng B, Zhou X, Gao X PLoS One. 8:e78787(2013).