Stem-loop pxy-mir-8489b

Accession

MI0027370

Description

Plutella xylostella pxy-mir-8489b precursor miRNA

Gene family

MIPF0002034; mir-8489

Sequence

59 reads, 856 reads per million, 4 experiments

guagccuaauguagUGUGCCGUUACCUCUGAAUUUGGaugaauuuauggacauacaagcucagagguaacggccacuaaauuggccau
...(((.(((.(((((.((((((((((((((.((((..((..........))..)))).))))))))))))))))))).))))))...

Structure

gua   u   g     U              A    Ga  aauu 
   gcc aau uagUG GCCGUUACCUCUGA UUUG  ug    u
   ||| ||| ||||| |||||||||||||| ||||  ||     
   cgg uua aucac cggcaauggagacu gaac  ac    a
uac   -   a     -              c    au  aggu 

Annotation confidence Not enough data

Genome context

scaffold_70: 783518-783605 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pxy-mir-8489b

Mature pxy-miR-8489b

• Accession: MIMAT0033775
• Description: Plutella xylostella pxy-miR-8489b mature miRNA
• Sequence: 15 - UGUGCCGUUACCUCUGAAUUUGG - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787