miRBase entry: pxy-mir-8533

Stem-loop pxy-mir-8533


Accession
MI0027373
Description
Plutella xylostella pxy-mir-8533 precursor miRNA

Literature search
1 open access papers mention pxy-mir-8533
(1 sentences)

Sequence

17 reads, 707 reads per million, 4 experiments
gucguuuguugugucgaugggcaagcccaaaauccacuagaaagggcgagaaagaaUUCUAGAGGAUCUUGGGCGCGCguacucgacacuacugaacuac
...((((((.(((((((((.((..((((((.((((.((((((....(......)..)))))).)))).))))))..)).)).))))))).)).))))...

Structure
guc    -  u       -  g  aa      a    a      aggg ga 
   guuu gu gugucga ug gc  gcccaa aucc cuagaa    c  g
   |||| || ||||||| || ||  |||||| |||| ||||||    |   
   caag ca cacagcu au CG  CGGGUU UAGG GAUCUU    g  a
cau    u  u       c  g  CG      C    A      --aa aa 


Annotation confidence Not enough data
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Genome context
scaffold_2: 1896956-1897055 [-]

Database links

Mature pxy-miR-8533

Accession MIMAT0033779
Description Plutella xylostella pxy-miR-8533 mature miRNA
Sequence 57 - UUCUAGAGGAUCUUGGGCGCGC - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787