miRBase entry: pxy-mir-8534

Stem-loop pxy-mir-8534


Accession
MI0027374
Description
Plutella xylostella pxy-mir-8534 precursor miRNA

Literature search
1 open access papers mention pxy-mir-8534
(1 sentences)

Sequence

8 reads, 712 reads per million, 3 experiments
gugcccaaUGACGGCAUCGGCAGCCUAAUcaugugcuaaaauccuGAAGUCUGCCGAUGCCGUCAGUgggacc
((.((((.(((((((((((((((.((..(((.(.........).))))).))))))))))))))).)))))).

Structure
-  g    a               C  AA   u ugc 
 gu ccca UGACGGCAUCGGCAG CU  Uca g   u
 || |||| ||||||||||||||| ||  ||| |   a
 ca gggU ACUGCCGUAGCCGUC GA  AGu c   a
c  -    G               U  --   c uaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_4: 961737-961809 [-]

Database links

Mature pxy-miR-8534-5p

Accession MIMAT0033780
Description Plutella xylostella pxy-miR-8534-5p mature miRNA
Sequence 9 - UGACGGCAUCGGCAGCCUAAU - 29
Evidence experimental
Illumina [1]

Mature pxy-miR-8534-3p

Accession MIMAT0033781
Description Plutella xylostella pxy-miR-8534-3p mature miRNA
Sequence 46 - GAAGUCUGCCGAUGCCGUCAGU - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787