Stem-loop pxy-mir-193

Accession

MI0027375

Description

Plutella xylostella pxy-mir-193 precursor miRNA

Sequence

8 reads, 258 reads per million, 4 experiments

guguaguauaccugucuauuucagggugccuucaucaugacgaggaaguccauccuguggcgAGGGUCUUAGCGGUCGAGUGGgcguucccuucccuacuggccugcuaagucccaagccucgggguggaauagcuucggagcugagaagaaacugcuggacgaagauauuguacuagca
((.(((((((..(((((..((((((((..((((.((((..(((((...(((((((((.(((..(((.((((((((.(.((((((.(.......))))))).).)))))))).)))..))).)))))))))....)))))..).)))))))..))).)))))...))))).))))))))).

Structure

-  g       cc     -au     -   gc    a   - ga     -aag         u   gA   U        U G      c uu 
 gu uaguaua  ugucu   uucag ggu  cuuc uca u  cgagg    uccauccug ggc  GGG CUUAGCGG C AGUGGg g  c
 || |||||||  |||||   ||||| |||  |||| ||| |  |||||    ||||||||| |||  ||| |||||||| | |||||| |  c
 cg aucaugu  auaga   agguc uca  gaag agu g  gcuuc    agguggggc ccg  ccc gaaucguc g ucaucc c  c
a  -       -u     agc     g   aa    -   c ag     gaua         u   aa   u        c g      - uu 

Annotation confidence Not enough data

Genome context

scaffold_523: 140581-140760 [+]

Mature pxy-miR-193

• Accession: MIMAT0033782
• Description: Plutella xylostella pxy-miR-193 mature miRNA
• Sequence: 63 - AGGGUCUUAGCGGUCGAGUGG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787