Stem-loop pxy-mir-8539-1

Accession

MI0027388

Description

Plutella xylostella pxy-mir-8539-1 precursor miRNA

Gene family

MIPF0002084; mir-8539

Sequence

22 reads, 1241 reads per million, 4 experiments

uauguaauuaguggcggAGUAAUUUCCAGAUAAACGUAcgucuuuauaucuaCGUUUAUUUGGAAACUAUCCCggcacaauuaccau
...((((((.(((.(((.(((.((((((((((((((((.((......)).)))))))))))))))).))).))).)))))))))...

Structure

uau      a   g   A   A                c  cu 
   guaauu gug cgg GUA UUUCCAGAUAAACGUA gu  u
   |||||| ||| ||| ||| |||||||||||||||| ||   
   cauuaa cac gCC UAU AAAGGUUUAUUUGCau ua  u
uac      -   g   C   C                c  ua 

Annotation confidence Not enough data

Genome context

scaffold_802: 29871-29957 [-]

Mature pxy-miR-8539-5p

• Accession: MIMAT0033796
• Description: Plutella xylostella pxy-miR-8539-5p mature miRNA
• Sequence: 18 - AGUAAUUUCCAGAUAAACGUA - 38
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-8539-3p

• Accession: MIMAT0033797
• Description: Plutella xylostella pxy-miR-8539-3p mature miRNA
• Sequence: 53 - CGUUUAUUUGGAAACUAUCCC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787