Stem-loop pxy-mir-8521a-5

Accession

MI0027395

Description

Plutella xylostella pxy-mir-8521a-5 precursor miRNA

Gene family

MIPF0001871; mir-8521

Sequence

46 reads, 2966 reads per million, 4 experiments

uccucuuguguucguucuugucucuggcgcggcagucagaauucgggacgagcccggagcgguggCUUGUCCCGAAUUUUGACUCUGCCaaaugaaaaccagaacguagacuagguuc
.(((...((.(.((((((.((.((..(.((((.((((((((((((((((((((((......).))))))))))))))))))))))))))....))..)).)))))).).)).)))...

Structure

--u   cuu  g u      u  -c  --ug c    c                     - gg 
   ccu   gu u cguucu gu  uc    g gcgg agucagaauucgggacgagcc c  a
   |||   || | |||||| ||  ||    | |||| ||||||||||||||||||||| |   
   gga   ca a gcaaga ca  ag    C CGUC UCAGUUUUAAGCCCUGUUCgg g  g
cuu   --u  g u      c  aa  uaaa -    -                     u gc 

Annotation confidence Not enough data

Genome context

scaffold_127: 933148-933265 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from pxy-mir-8521a-5

Mature pxy-miR-8521a

• Accession: MIMAT0033752
• Description: Plutella xylostella pxy-miR-8521a mature miRNA
• Sequence: 66 - CUUGUCCCGAAUUUUGACUCUGCC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787