miRBase entry: pxy-mir-281

Stem-loop pxy-mir-281


Accession
MI0027400
Description
Plutella xylostella pxy-mir-281 precursor miRNA
Gene family
MIPF0000087; mir-46

Literature search
3 open access papers mention pxy-mir-281
(6 sentences)

Sequence

238 reads, 9357 reads per million, 4 experiments
ucuguuaaugaagagagcuauccgucgacaguauugaccauaaaaacUGUCAUGGAGUUGCUCUCUUUAugaacgg
.(((((.(((((((((((..(((((.((((((.((.......)).)))))))))))...))))))))))).)))))

Structure
u     a           -ua     c      a  ga 
 cuguu augaagagagc   uccgu gacagu uu  c
 ||||| |||||||||||   ||||| |||||| ||  c
 ggcaa uAUUUCUCUCG   AGGUA CUGUca aa  a
-     g           UUG     -      a  au 


Annotation confidence Not enough data
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Genome context
scaffold_377: 158087-158162 [-]

Database links

Mature pxy-miR-281

Accession MIMAT0033804
Description Plutella xylostella pxy-miR-281 mature miRNA
Sequence 48 - UGUCAUGGAGUUGCUCUCUUUA - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787