miRBase entry: pxy-mir-2525-2

Stem-loop pxy-mir-2525-2


Accession
MI0027406
Description
Plutella xylostella pxy-mir-2525-2 precursor miRNA
Gene family
MIPF0002047; mir-2525


Sequence

97 reads, 3753 reads per million, 4 experiments
ugccagcguccAGUGGCAACAGUUGCCAACAGAcauuuugaaaccugguuuuUCUGGCGGCAACUGUUGUGGACaggacgcuguaa
...((((((((.((.((((((((((((..((((......(((((...)))))))))..))))))))))))..)).))))))))...

Structure
ugc        A  -G            AA    cauuuu     c 
   cagcgucc GU  GCAACAGUUGCC  CAGA      gaaac  
   |||||||| ||  ||||||||||||  ||||      ||||| u
   gucgcagg CA  UGUUGUCAACGG  GUCU      uuuug  
aau        a  GG            CG    ------     g 


Annotation confidence Not enough data
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Genome context
scaffold_66: 628231-628316 [+]

Database links

Mature pxy-miR-2525-5p

Accession MIMAT0033809
Description Plutella xylostella pxy-miR-2525-5p mature miRNA
Sequence 12 - AGUGGCAACAGUUGCCAACAGA - 33
Evidence experimental
Illumina [1]

Mature pxy-miR-2525-3p

Accession MIMAT0033810
Description Plutella xylostella pxy-miR-2525-3p mature miRNA
Sequence 53 - UCUGGCGGCAACUGUUGUGGAC - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787