Stem-loop pxy-mir-8545

Accession

MI0027409

Description

Plutella xylostella pxy-mir-8545 precursor miRNA

Sequence

1 reads, 119 reads per million, 1 experiments

uggugagucuagccuGGUGCAGGGCCUGGUCGAUGuggugcgggugcaccugacgguggugcugcaugucgcagugguugccgagcaccaccacgggcaggucagccggcacucggcccagcuccuucaccacauacucaaau
...(((((......(((((.(((((..((((((....((((.(((..(((((.(.((((((.(((.((..(((.....))))).))).)))))).).)))))..))).))))))))))..)).))).)))))...)))))...

Structure

ugg     cuagcc     C   -  CU      UGug    g   gc     a g      c   a  uc   g 
   ugagu      uGGUG AGG GC  GGUCGA    gugc ggu  accug c guggug ugc ug  gca u
   |||||      ||||| ||| ||  ||||||    |||| |||  ||||| | |||||| ||| ||  ||| g
   acuca      accac ucc cg  ccggcu    cacg ccg  uggac g caccac acg gc  cgu g
uaa     ---uac     u   u  ac      ----    g   ac     g g      c   a  --   u 

Annotation confidence Not enough data

Genome context

scaffold_275: 1005814-1005956 [+]

Mature pxy-miR-8545

• Accession: MIMAT0033813
• Description: Plutella xylostella pxy-miR-8545 mature miRNA
• Sequence: 16 - GGUGCAGGGCCUGGUCGAUG - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787