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miRBase |
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Stem-loop sequence atr-MIR8562c |
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Accession | MI0027440 (change log) | ||||
Description | Amborella trichopoda miR8562c stem-loop | ||||
Gene family | MIPF0001861; MIR8562 | ||||
Stem-loop |
ga cuaa u u a c u aaaaaau - c uaaaaauaaauagacuaaaauuccucugaaaauuuguga 5' cgguca guugu uagu uuuuaauuuuuauuu uuuucuauaaauc gaaugaucugaaauuuggag gugugu cau ag gauaau uaauaaaaaua g |||||| ||||| |||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||| ||| || |||||| ||||||||||| 3' gccagu uaaca auca aaaguuaaaaauaaa aaaagauauuuag cuuacuagacuuuaaaccuc cgcaca gua uc cuguua auuauuuuuau a gc ugcg u c c a u gaaucac u - acuuuuuuuuuuaaaguuuuauauuuaacugguuuuaug |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence atr-miR8562c |
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Accession | MIMAT0033838 |
Sequence |
50 - ucagaaugaucugaaauuuggagc - 73 |
Deep sequencing | 4599 reads, 4 experiments |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:24357323
"The Amborella genome and the evolution of flowering plants"
Science. 342:1241089(2013).
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