miRBase entry: atr-MIR8565f

Stem-loop atr-MIR8565f


Accession
MI0027453
Description
Amborella trichopoda atr-MIR8565f precursor miRNA
Gene family
MIPF0001889; MIR8565


Sequence

4449 reads, 1691 reads per million, 4 experiments
aucaccauuaaaUUUGGCACAGAUCUCUAGAAAAGUugucacauaggugugggacuugacuuuucuagagaucugugccaaauuuaauggugau
((((((((((((((((((((((((((((((((((((((((.(((....))).)))..)))))))))))))))))))))))))))))))))))))

Structure
                                     --   a   a 
aucaccauuaaaUUUGGCACAGAUCUCUAGAAAAGUu  guc cau g
|||||||||||||||||||||||||||||||||||||  ||| |||  
uagugguaauuuaaaccgugucuagagaucuuuucag  cag gug g
                                     uu   g   u 


Annotation confidence Not enough data
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Genome context
scaffold00164: 370959-371052 [+]

Database links

Mature atr-miR8565f

Accession MIMAT0033851
Description Amborella trichopoda atr-miR8565f mature miRNA
Sequence 13 - UUUGGCACAGAUCUCUAGAAAAGU - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24357323
    The Amborella genome and the evolution of flowering plants
    "Amborella Genome Project"
    "Science (2013) 342:1241089