miRBase entry: atr-MIR8577

Stem-loop atr-MIR8577


Accession
MI0027462
Description
Amborella trichopoda atr-MIR8577 precursor miRNA


Sequence

879 reads, 6968 reads per million, 4 experiments
ucauguaucugaccccaaauaguugggAAAAGGCUCAGAUGAUGAUGAUGAugaugaucaucaucaucaucaucugagccuuaucccaacuauuugagaucagauacauga
((((((((((((.(.(((((((((((((.(((((((((((((((((((((((((...))))))))))))))))))))))))).))))))))))))).).))))))))))))

Structure
            c c             A                         u 
ucauguaucuga c caaauaguugggA AAGGCUCAGAUGAUGAUGAUGAuga  
|||||||||||| | ||||||||||||| ||||||||||||||||||||||||| g
aguacauagacu g guuuaucaacccu uuccgagucuacuacuacuacuacu  
            a a             a                         a 


Annotation confidence Low
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Genome context
scaffold00033: 798979-799089 [-]

Database links

Mature atr-miR8577

Accession MIMAT0033860
Description Amborella trichopoda atr-miR8577 mature miRNA
Sequence 28 - AAAAGGCUCAGAUGAUGAUGAUGA - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24357323
    The Amborella genome and the evolution of flowering plants
    "Amborella Genome Project"
    "Science (2013) 342:1241089