miRBase entry: atr-MIR8582

Stem-loop atr-MIR8582


Accession
MI0027468
Description
Amborella trichopoda atr-MIR8582 precursor miRNA


Sequence

301 reads, 201 reads per million, 2 experiments
agcgagcuuucucugcaaguuaugugaugaacuccuacuacaggagcgauuuuuaucugaaacgugacuuugaucaaagccccgaauauagUAGGAGUCAUGACGUAGCUUGcagaaagacauccucacu
((.(((...((((((((((((((((.((((.(((((((((..((.((((((....((........))....))))...)).)).....))))))))))))).))))))))))))))..))....))).))

Structure
  c   -cuu  --              g    a         ---ca  a  ---    uuua  uga 
ag gag    uc  ucugcaaguuaugu auga cuccuacua     gg gc   gauu    uc   a
|| |||    ||  |||||||||||||| |||| |||||||||     || ||   ||||    ||    
uc cuc    ag  agacGUUCGAUGCA UACU GAGGAUgau     cc cg   cuag    ag   a
  a   cuac  aa              G    -         auaag  c  aaa    uuuc  ugc 


Annotation confidence High
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Genome context
scaffold00039: 1732374-1732503 [+]

Database links

Mature atr-miR8582

Accession MIMAT0033867
Description Amborella trichopoda atr-miR8582 mature miRNA
Sequence 92 - UAGGAGUCAUGACGUAGCUUG - 112
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24357323
    The Amborella genome and the evolution of flowering plants
    "Amborella Genome Project"
    "Science (2013) 342:1241089